Anthology of Human Repetitive DNA
271
Tab. 4
Class I endogenous retroviruses.
Family name
Names in repbase update
Alternative
names
a
Coding status
tRNA
b
Internal portion
LTR
HERV-I
HERVI
LTR10B,
RTVL-I
Gag, PR, RT, RH,
I
LTR10A,
LTR10C,
LTR10E
IN, ENV
HERVIK10D
HERVIP10D
LTR10D
Gag, PR, RT, RH,
IN, ENV
K
HERVIP10F
HERVIP10F
LTR10F
Gag, PR, RT, RH,
IN, ENV
I/P
HERVIP10FH
HERVIP10FH
LTR10F
Nonautonomous
I/P
HERV-E
HERVE
LTR2
Gag, PR, RT, RH,
IN, ENV
E
Harlequin
HARLEQUIN
LTR2B, LTR2C
Nonautonomous
E
HERV3
HERV3
LTR4
BaEV, HERV-R,
ERV3
Gag, PR, RT, RH,
IN, ENV
R/L
HERV15
HERV15I
LTR15
RRHERV-I,
HSRIRT
Gag, PR, RT, RH,
IN, ENV
I
HERV17
HERV17
LTR17
HERV-W
Gag, PR, RT, RH,
IN, ENV
R/W
HERVS71
HERVS71
LTR6A, LTR6B
S71
Gag, PR, RT, RH,
IN, ENV
T
HERV9
HERV9
LTR12, LTR12B,
LTR12C,
LTR12D,
LTR12E
HERV-pHE1,
ERV9, PTR5,
HRES-1/1
Gag, PR, RT, RH,
IN, ENV
R
MER52AI
MER52AI
MER52A
Gag, PR, RT, RH,
P
MER52B,
MER52C,
MER52D
IN
HERVG25
HERVG25
LTR25
Gag, PR, RT, RH,
IN, Env
G
HUERS-P3
HUERS-P3
LTR9
HuRRS-P, HERV-P
Gag, PR, RT, RH,
IN, Env
P
HUERS-P3B
HUERS-P3B
LTR9B
Nonautonomous
Env
P
HUERS-P2
HUERS-P2
LTR1, LTR1B,
LTR1C,
Nonautonomous
Gag
P
LTR1D
HUERS-P1
HUERS-P1
LTR8, LTR8A
?
P
HERV-H
HERVH
LTR7A, LTR7B
RTVL-H, RTVL-H2,
RGH
Gag, PR, RT, RH,
IN, Env
H
HERV19
HERV19I
LTR19A
Nonautonomous
F
HERVFH19
HERVFH19I
LTR19B, LTR19C,
HERV-F
Gag, PR, RT, RH,
IN, Env
F
(
continued overleaf
)
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